A reproducible AWS HealthOmics private workflow that runs GPU-accelerated Parabricks DeepVariant (BAM to VCF), built to work around a silent 0-byte-VCF failure in the prebuilt Ready2Run pipeline. Includes a Claude Skill for AI-assisted use.
npx skills add charleschuang1993/healthomics-deepvariant-privateA reproducible AWS HealthOmics private workflow that runs GPU-accelerated Parabricks DeepVariant (BAM to VCF), built to work around a silent 0-byte-VCF failure in the prebuilt Ready2Run pipeline. Includes a Claude Skill for AI-assisted use.
API Interrogator to produce MCP, A2A and OpenAPI specifications, and audit/review codebases with Expert Proxies
Remote Claude Code sessions through Discord — self-hosted bot with streaming, permissions, and CLI interop
Centralized AI agent skill repository for the Integration Team, providing reusable modules, automation scripts, and standardized patterns to orchestrate workflows, transform data, and execute reliable integration tasks across internal and external systems at scale.
Reproducible ML workflows for Codex and Claude Code: data access, leakage‑safe splits, metrics, baselines, experiments, and explanations. Built for Git, DVC, and MLflow.
🛠️ Enable seamless collaboration between Claude and multiple models/tools with the Agent Skills collection for efficient coding and AI integration.
Curated skill pack for LLM agents in engineer and science workflow (Cursor & Claude ready).