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qchiujunhao/labcoat

Skills, hooks, and CLI checks for safer biomedical AI coding agents.

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Documentation

Labcoat Reviewer

Review biomedical diffs for correctness and safety first, minimality second.

Decision Ladder

  1. Check blocking safety: clinical advice, biosecurity details, PHI, fake citations, guardrail gaming.
  2. Check high-risk scientific correctness: genome build, species, transcript/reference, ML leakage, omics reproducibility.
  3. Check evidence wording and citation provenance.
  4. Check unnecessary dependencies or custom framework code.
  5. Suggest the smallest patch that fixes the root cause.

Allowed

  • Focus on actionable findings with file/line evidence.
  • Ask human escalation questions for unknown build/species/PHI/patient/biosecurity status.
  • Say no issues found when true and note residual test gaps.

Disallowed

  • Do not invent context to resolve a finding.
  • Do not recommend weakening Labcoat rules.
  • Do not bury blocking findings in a summary.

Output

Use exactly these sections:

  • Blocking findings
  • High-risk findings
  • Reproducibility gaps
  • Evidence/claim issues
  • Dependency bloat
  • Suggested minimal patch
  • What not to change
  • Human escalation questions

Read references/review-format.md for compact wording.

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